Skip to main content
Skip to main content

Advanced Digital Microscopy Core Facility (IRB Barcelona)

ADM

IRB Barcelona (Institute for Research in Biomedicine)
IRB Barcelona (Institute for Research in Biomedicine)
Barcelona Institute of Science and Technology- BIST
Barcelona
12
Equipment
17
Technologies
0
Training

Equipment

Leica Microsystems TCS-SPE / Leica TCS-SPE Leica TCS SPE

Leica TCS SPE

Leica Microsystems TCS-SPE Laser Scanning Confocal Microscope

CUSTOM SPIM / CUSTOM SPIM SPIM for high resolution Live Imaging

SPIM for high resolution Live Imaging

CUSTOM SPIM

Olympus ScanR - Cell Xcellence - TIRF / Olympus ScanR - Cell Xcellence...

ScanR / Xcellence / TIRF microscope

Olympus ScanR - Cell Xcellence - TIRF Brightfield/Transmission Microscopy Contrasts High-Content Screening (HCS)

Andor Revolution xD spinning disk CSU-X1, FRAPPA / Andor Revolution xD...

Andor Revolution xD

Andor Revolution xD spinning disk CSU-X1, FRAPPA Spinning Disk Confocal Microscope

CUSTOM Macro-SPIM / CUSTOM Macro-SPIM MacroSPIM for full organ imaging

double MacroSPIM for full organ imaging

CUSTOM Macro-SPIM Lightsheet: Single Plane Illumination Microscope (SPIM) and variants

CUSTOM Laser Nanosurgery / CUSTOM Laser Nanosurgery Laser Cutter/Nanos...

Laser Cutter/Nanosurgery for live specimens

CUSTOM Laser Nanosurgery Laser Microdissection & Catapulting Spinning Disk Confocal Microscope

Zeiss (Carl Zeiss Microscopy Gmbh) Laser Scanning Confocal Spectral LS...

Zeiss LSM780 with Picoquant TCSPC FLIM

Zeiss (Carl Zeiss Microscopy Gmbh) Laser Scanning Confocal Spectral LSM780 Laser Scanning Confocal Microscope

Olympus MVX10 / Olympus MVX10 Macroscope Olympus MVX10

Macroscope Olympus MVX10

Olympus MVX10

CUSTOM dOPM lightsheet on inverted microscope / CUSTOM dOPM lightsheet...

dOPM lightsheet on inverted microscope

CUSTOM dOPM lightsheet on inverted microscope High-Content Screening (HCS) Wide Field Fluorescence Microscope

Nikon LIPSI, HTS w. robot loader / Nikon LIPSI, HTS w. robot loader

LIPSI High-content, High-Throughput confocal, robot loader

Nikon LIPSI, HTS w. robot loader Brightfield/Transmission Microscopy Contrasts High-Content Screening (HCS)

Leica Microsystems Stellaris 8 w. WLL, STED 3X, FALCON / Leica Microsy...

Stellaris STED FLIM White Laser

Leica Microsystems Stellaris 8 w. WLL, STED 3X, FALCON Laser Scanning Confocal Microscope Stimulated emission depletion (STED) microscopy

Zeiss (Carl Zeiss Microscopy Gmbh) LSM880, Airyscan, Elyra PS.1 / Zeis...

Confocal+Elyra: ISM SIM SMLM

Zeiss (Carl Zeiss Microscopy Gmbh) LSM880, Airyscan, Elyra PS.1 Laser Scanning Confocal Microscope Structured Illumination Microscope (SIM)

Available Technologies

- HCS- High-Content Screening

HCS- High-Content Screening

High Content Imaging/Analysis (HCI/HCA), and Screening (HCS/HTS) with Confocal and Widefield systems. Smart imaging, multiwell plates loading for HTS...

Lab-specific experience

> 14 years, 4 staff available. Custom Development of Software tools for hardware control, analysis and bridging both.

- Total Internal Reflection Fluorescence Microscopy (TIRF)

Total Internal Reflection Fluorescence Microscopy (TIRF)

Total Internal Reflection Microscopy. 2-colors applications for membrane dynamics, cytoskeleton, in vitro studies, bio-functionalized surfaces.

Lab-specific experience

> 10 years experience, 3 staff available for experiments.

- Live Ablation and Pulsed Laser Micro- & Nano-Surgery

Live Ablation and Pulsed Laser Micro- & Nano-Surgery

Pulsed-laser Micro- and Nano-Surgery in living cells and organisms. Applications: Intracellular surgery: Cytoskeletal dynamics, organelle ablation a...

Lab-specific experience

> 15 years in development, implementation, applications and theory. Experience and Technology accessible through the EuroBioimaging Node Candidate B-Livin: Barcelona Live and Intravital Imaging Node (in partnership with University of Barcelona and CRG). more details at https://www.eurobioimaging-interim.eu/

- Lightsheet, Single Plane Illumination Microscopy (SPIM)

Single Plane Illumination Microscopy (SPIM)

= Custom Development of 2 Light-sheet systems: Live Imaging of Large samples (e.g. embryos, organoids...) Full Organ Imaging with optically cleared s...

Lab-specific experience

> 15 years system development, > 10 years Image analysis with SPIMages. 3x staff available for instrument use.

- Image Analysis

Image Analysis

Custom Analysis Development in Java, Matlab, ImageJ-related programming languages. Software used: ImageJ / Fiji, Matlab, Imaris, Ilastik, Amira, NI Vi...

Lab-specific experience

> 15 years in Image Analysis & signal processing. Custom Development in Java, Matlab, ImageJ-related programming languages. Coordinators of NEUBIAS, Network of European Bioimage Analysts (www.neubias.org), a COST Action CA15124 funded by the EU.

- FLIM- Fluorescence Lifetime Imaging Microscopy

FLIM- Fluorescence Lifetime Imaging Microscopy

FLIM is an imaging technique for producing an image based on the differences in the exponential decay rate of the fluorescence from a fluorescent samp...

Lab-specific experience

10y. experience with TCSPC (Picoquant on Zeiss LSM780 confocal) and more recently imaging with Leica Stellaris FLIM-based system.

- FRET- Förster Resonance Energy Transfer

FRET- Förster Resonance Energy Transfer

Förster Resonance Energy Transfer (FRET) is a process where an excited fluorophore (donor)transfers energy to another fluorophore (acceptor) [1]. Reso...

Lab-specific experience

Sensitised emission, Acceptor Photobleaching, FLIM-based FRET

- Lightsheet, "Open-Top" & single objective variants

Lightsheet, "Open-Top" & single objective variants

While classical lightsheet architectures (e.g. SPIM and variants) use orthogonal lenses to couple illumination and detection, sample mounting through...

Lab-specific experience

Double view OPM (Oblique Illumination Microscopy) system for high-content analysis of live organoids, live tissues slabs and more. Very long term-imaging (days) and high pace.

- Super Resolution/ Stimulated Emission Depletion microscopy (STED)

Super Resolution/ Stimulated Emission Depletion microscopy (...

STED (Stimulated Emission Depletion Microscopy) uses two laser pulses, the excitation pulse for excitation of the fluorophores to their fluorescent st...

- FCS- Fluorescence Correlation Spectroscopy

FCS- Fluorescence Correlation Spectroscopy

Fluorescence Correlation Spectroscopy (FCS) is a tool that provides quantitative localized measurements of important physical parameters including mec...

- Super Resolution/ Stochastic Optical Reconstruction microscopy (STOR...

Super Resolution/ Stochastic Optical Reconstruction microsco...

Stochastic Optical Reconstruction Microscopy (STORM), as well as PALM or fPALM, is a super-resolution imaging technique that utilizes sequential activ...

- Super Resolution/ Structured Illumination Microscopy (SIM)

Super Resolution/ Structured Illumination Microscopy (SIM)

Structured Illumination (SI) - or patterned illumination - is the wide-field version of breaking the diffraction limit of light. SI relies on both spe...

- Image Scanning Microscopy (ISM)

Image Scanning Microscopy (ISM)

A 3D imaging technique using detector array and structured illumination to yield super resolution imaging with almost 2x resolution increase and highe...

- Spinning Disk Confocal Microscopy

Spinning Disk Confocal Microscopy

Laser illumination and sample's emission lights travel through a revolving Mask made of pinholes (e.g. Nipkow disk) to provide optical sectioning. Bec...

- Laser Scanning Confocal Microscopy

Laser Scanning Confocal Microscopy

Confocal microscopy offers several advantages over conventional widefield optical microscopy, including the ability to control depth of field, elimina...

- Live Cell Imaging

Live Cell Imaging

Cell biologists are increasingly using live-cell imaging techniques to provide clues into the fundamental nature of cellular and tissue structure and...

- Wide Field Fluorescence Microscopy

Wide Field Fluorescence Microscopy

Conventional fluorescence excitation, upright or inverted, incl. Hg lamp, Metal-Halide or LED illumination.